Insight
is our reward

Publications in Natural Sciences by NOMIS researchers

NOMIS Researcher(s)

Published in

June 1, 2022

The shrinking of glaciers is among the most iconic consequences of climate change. Despite this, the downstream consequences for ecosystem processes and related microbiome structure and function remain poorly understood. Here, using a space-for-time substitution approach across 101 glacier-fed streams (GFSs) from six major regions worldwide, we investigated how glacier shrinkage is likely to impact the organic matter (OM) decomposition rates of benthic biofilms. To do this, we measured the activities of five common extracellular enzymes and estimated decomposition rates by using enzyme allocation equations based on stoichiometry. We found decomposition rates to average 0.0129 (% d−1), and that decreases in glacier influence (estimated by percent glacier catchment coverage, turbidity, and a glacier index) accelerates decomposition rates. To explore mechanisms behind these relationships, we further compared decomposition rates with biofilm and stream water characteristics. We found that chlorophyll-a, temperature, and stream water N:P together explained 61% of the variability in decomposition. Algal biomass, which is also increasing with glacier shrinkage, showed a particularly strong relationship with decomposition, likely indicating their importance in contributing labile organic compounds to these carbon-poor habitats. We also found high relative abundances of chytrid fungi in GFS sediments, which putatively parasitize these algae, promoting decomposition through a fungal shunt. Exploring the biofilm microbiome, we then sought to identify bacterial phylogenetic clades significantly associated with decomposition, and found numerous positively (e.g., Saprospiraceae) and negatively (e.g., Nitrospira) related clades. Lastly, using metagenomics, we found evidence of different bacterial classes possessing different proportions of EEA-encoding genes, potentially informing some of the microbial associations with decomposition rates. Our results, therefore, present new mechanistic insights into OM decomposition in GFSs by demonstrating that an algal-based “green food web” is likely to increase in importance in the future and will promote important biogeochemical shifts in these streams as glaciers vanish.

Research field(s)
Natural Sciences, Biology, Ecology

NOMIS Researcher(s)

April 8, 2022

Recent efforts in understanding the course and severity of SARS-CoV-2 infections have highlighted both potentially beneficial and detrimental effects of cross-reactive antibodies derived from memory immunity. Specifically, due to a significant degree of sequence similarity between SARS-CoV-2 and other members of the coronavirus family, memory B-cells that emerged from previous infections with endemic human coronaviruses (HCoVs) could be reactivated upon encountering the newly emerged SARS-CoV-2, thus prompting the production of cross-reactive antibodies. Determining the affinity and concentration of these potentially cross-reactive antibodies to the new SARS-CoV-2 antigens is therefore particularly important when assessing both existing immunity against common HCoVs and adverse effects like antibody-dependent enhancement (ADE) in COVID-19. However, these two fundamental parameters cannot easily be disentangled by surface-based assays like enzyme-linked immunosorbent assays (ELISAs), which are routinely used to assess cross-reactivity. Here, we have used microfluidic antibody affinity profiling (MAAP) to quantitatively evaluate the humoral immune response in COVID-19 convalescent patients by determining both antibody affinity and concentration against spike antigens of SARS-CoV-2 directly in nine convalescent COVID-19 patient and three pre-pandemic sera that were seropositive for common HCoVs. All 12 sera contained low concentrations of high-affinity antibodies against spike antigens of HCoV-NL63 and HCoV-HKU1, indicative of past exposure to these pathogens, while the affinity against the SARS-CoV-2 spike protein was lower. These results suggest that cross-reactivity as a consequence of memory reactivation upon an acute SARS-CoV-2 infection may not be a significant factor in generating immunity against SARS-CoV-2.

Research field(s)
Natural Sciences, Chemistry, Medicinal & Biomolecular Chemistry

NOMIS Researcher(s)

Published in

March 1, 2022

Biomolecular condensates are dense assemblies of proteins that form distinct biochemical compartments without being surrounded by a membrane. Some, such as P granules and stress granules, behave as droplets and contain many millions of molecules. Others, such as transcriptional condensates that form on the surface of DNA, are small and contain thousands of molecules. The physics behind the formation of small condensates on DNA surfaces is still under discussion. Here we investigate the nature of transcription factor condensates using the pioneer transcription factor Krüppel-like factor 4 (Klf4). We show that Klf4 can phase separate on its own at high concentrations, but at low concentrations, Klf4 only forms condensates on DNA. Using optical tweezers, we demonstrate that these Klf4 condensates form on DNA as a type of surface condensation. This surface condensation involves a switch-like transition from a thin adsorbed layer to a thick condensed layer, which shows hallmarks of a prewetting transition. The localization of condensates on DNA correlates with sequence, suggesting that the condensate formation of Klf4 on DNA is a sequence-dependent form of surface condensation. Prewetting together with sequence specificity can explain the size and position control of surface condensates. We speculate that a prewetting transition of pioneer transcription factors on DNA underlies the formation and positioning of transcriptional condensates and provides robustness to transcriptional regulation.

Research field(s)
Natural Sciences, Physics & Astronomy, Fluids & Plasmas

NOMIS Researcher(s)

February 1, 2022

A variety of different nanomaterials (NMs) such as microbubbles (MBs), nanobubbles (NBs), nanodroplets (NDs), and silica hollow meso-structures have been tested as ultrasound contrast agents for the detection of heart diseases. The inner part of these NMs is made gaseous to yield an ultrasound contrast, which arises from the difference in acoustic impedance between the interior and exterior of such a structure. Furthermore, to specifically achieve a contrast in the diseased heart region (DHR), NMs can be designed to target this region in essentially three different ways (i.e., passively when NMs are small enough to diffuse through the holes of the vessels supplying the DHR, actively by being associated with a ligand that recognizes a receptor of the DHR, or magnetically by applying a magnetic field orientated in the direction of the DHR on a NM responding to such stimulus). The localization and resolution of ultrasound imaging can be further improved by applying ultrasounds in the DHR, by increasing the ultrasound frequency, or by using harmonic, sub-harmonic, or super-resolution imaging. Local imaging can be achieved with other non-gaseous NMs of metallic composition (i.e., essentially made of Au) by using photoacoustic imaging, thus widening the range of NMs usable for cardiac applications. These contrast agents may also have a therapeutic efficacy by carrying/activating/releasing a heart disease drug, by triggering ultrasound targeted microbubble destruction or enhanced cavitation in the DHR, for example, resulting in thrombolysis or helping to prevent heart transplant rejection.

Research field(s)
Natural Sciences, Physics & Astronomy, Chemical Physics

NOMIS Researcher(s)

February 1, 2022

The article presents evidence about the Middle Palaeolithic and Middle to Upper Palaeolithic transition interval in the karst area of the Danube Gorges in the Lower Danube Basin. We review the extant data and present new evidence from two recently investigated sites found on the Serbian side of the Danube River – Tabula Traiana and Dubočka-Kozja caves. The two sites have yielded layers dating to both the Middle and Upper Palaeolithic and have been investigated by the application of modern standards of excavation and recovery along with a suite of state-of-the-art analytical procedures. The presentation focuses on micromorphological analyses of the caves’ sediments, characterisation of cryptotephra, a suite of new radiometric dates (accelerator mass spectrometry and optically stimulated luminescence) as well as proteomics (zooarchaeology by mass spectrometry) and stable isotope data in discerning patterns of human occupation of these locales over the long term.

Research field(s)
Natural Sciences, Earth & Environmental Sciences, Paleontology

NOMIS Researcher(s)

January 1, 2022

Plant functional traits can predict community assembly and ecosystem functioning and are thus widely used in global models of vegetation dynamics and land–climate feedbacks. Still, we lack a global understanding of how land and climate affect plant traits. A previous global analysis of six traits observed two main axes of variation: (1) size variation at the organ and plant level and (2) leaf economics balancing leaf persistence against plant growth potential. The orthogonality of these two axes suggests they are differently influenced by environmental drivers. We find that these axes persist in a global dataset of 17 traits across more than 20,000 species. We find a dominant joint effect of climate and soil on trait variation. Additional independent climate effects are also observed across most traits, whereas independent soil effects are almost exclusively observed for economics traits. Variation in size traits correlates well with a latitudinal gradient related to water or energy limitation. In contrast, variation in economics traits is better explained by interactions of climate with soil fertility. These findings have the potential to improve our understanding of biodiversity patterns and our predictions of climate change impacts on biogeochemical cycles.

Research field(s)
Natural Sciences, Biology, Evolutionary Biology

NOMIS Researcher(s)

Published in

January 1, 2022

Relational values have recently been proposed as a concept to expand our understanding of environmental values from the categories previously dominating the discourse: instrumental (nature for people’s sake) and intrinsic values (nature for its own sake). Empirical and conceptual research on relational values has so far focused on the content of relational values or their relationship to other kinds of values. In this paper, we fill a key gap in understanding exactly what relational values are and how they work; we call this the ‘syntax’ of relational values. We do so by applying the Syntax of Environmental Values Framework, which describes relational values as bidirectional, expressed by genuine respect and care on the one hand and an eudaimonic contribution to wellbeing on the other. We developed a novel interview protocol which we applied in semistructured interviews with Swiss alpine farmers. We examine how both of these directions are manifested in farmers’ relational values. Our results showed how the bidirectionality manifests in relational values of alpine farmers. Specifically, we identified three components of each directionality. The intrinsic element of relational values was constituted by: an attitude of respect, attention to the relationship and practices of care. The instrumental element of relational values was constituted by: emotional and experiential contributions for the valuer, satisfaction and joy in the relationship, and practical contributions to the activities associated with the relationship (e.g. farm management). We further elaborate on the conditions required to sustain relational values, including physical, emotional and sociopolitical conditions. These results informed an elaborated conceptual framework of relational values, and environmental valuing more generally. While specifically derived from our dataset, we believe our conclusions could directly or in a modified form, apply to diverse cases of relational valuing. In sum, this paper offers a concrete step towards better characterizing, distinguishing and applying the relational values concept. Read the free Plain Language Summary for this article on the Journal blog.

Research field(s)
Natural Sciences, Biology, Ecology

NOMIS Researcher(s)

October 25, 2021

Maintaining healthy, productive ecosystems in the face of pervasive and accelerating human impacts including climate change requires globally coordinated and sustained observations of marine biodiversity. Global coordination is predicated on an understanding of the scope and capacity of existing monitoring programs, and the extent to which they use standardized, interoperable practices for data management. Global coordination also requires identification of gaps in spatial and ecosystem coverage, and how these gaps correspond to management priorities and information needs. We undertook such an assessment by conducting an audit and gap analysis from global databases and structured surveys of experts. Of 371 survey respondents, 203 active, long-term (>5 years) observing programs systematically sampled marine life. These programs spanned about 7% of the ocean surface area, mostly concentrated in coastal regions of the United States, Canada, Europe, and Australia. Seagrasses, mangroves, hard corals, and macroalgae were sampled in 6% of the entire global coastal zone. Two-thirds of all observing programs offered accessible data, but methods and conditions for access were highly variable. Our assessment indicates that the global observing system is largely uncoordinated which results in a failure to deliver critical information required for informed decision-making such as, status and trends, for the conservation and sustainability of marine ecosystems and provision of ecosystem services. Based on our study, we suggest four key steps that can increase the sustainability, connectivity and spatial coverage of biological Essential Ocean Variables in the global ocean: (1) sustaining existing observing programs and encouraging coordination among these; (2) continuing to strive for data strategies that follow FAIR principles (findable, accessible, interoperable, and reusable); (3) utilizing existing ocean observing platforms and enhancing support to expand observing along coasts of developing countries, in deep ocean basins, and near the poles; and (4) targeting capacity building efforts. Following these suggestions could help create a coordinated marine biodiversity observing system enabling ecological forecasting and better planning for a sustainable use of ocean resources.

Research field(s)
Natural Sciences, Biology, Marine Biology & Hydrobiology

NOMIS Researcher(s)

September 1, 2021

Science, as both a body of knowledge and a process of acquiring new knowledge, is widely regarded as playing a central role in biodiversity conservation. Science undoubtedly enhances our understanding of the drivers of biodiversity loss and assists in the formulation of practical and policy responses, but it has not yet proved sufficiently influential to reverse global trends of biodiversity decline. This review seeks to critically examine the science of biodiversity conservation and to identify any hidden assumptions that, once interrogated and explored, may assist in improving conservation science, policy and practice. By drawing on existing reviews of the literature, this review describes the major themes of the literature and examines the historical shifts in the framing of conservation. It highlights the dominance of research philosophies that view conservation through a primarily ecological lens, changes in the goal(s) of conservation and a lack of clarity over the role(s) of science in biodiversity conservation. Finally, this review offers a simple framework to more clearly and consistently conceptualize the role(s) of science in biodiversity conservation in the future. Greater critical reflection on how conservation science might better accommodate multiple knowledges, goals and values could assist in ‘opening up’ new, legitimate pathways for biodiversity conservation.

Research field(s)
Natural Sciences, Biology, Ecology

NOMIS Researcher(s)

Published in

August 1, 2021

Decades of research and policy interventions on biodiversity have insufficiently addressed the dual issues of biodiversity degradation and social justice. New approaches are therefore needed. We devised a research and action agenda that calls for a collective task of revisiting biodiversity toward the goal of sustaining diverse and just futures for life on Earth. Revisiting biodiversity involves critically reflecting on past and present research, policy, and practice concerning biodiversity to inspire creative thinking about the future. The agenda was developed through a 2-year dialogue process that involved close to 300 experts from diverse disciplines and locations. This process was informed by social science insights that show biodiversity research and action is underpinned by choices about how problems are conceptualized. Recognizing knowledge, action, and ethics as inseparable, we synthesized a set of principles that help navigate the task of revisiting biodiversity. The agenda articulates 4 thematic areas for future research. First, researchers need to revisit biodiversity narratives by challenging conceptualizations that exclude diversity and entrench the separation of humans, cultures, economies, and societies from nature. Second, researchers should focus on the relationships between the Anthropocene, biodiversity, and culture by considering humanity and biodiversity as tied together in specific contexts. Third, researchers should focus on nature and economies by better accounting for the interacting structures of economic and financial systems as core drivers of biodiversity loss. Finally, researchers should enable transformative biodiversity research and action by reconfiguring relationships between human and nonhuman communities in and through science, policy, and practice. Revisiting biodiversity necessitates a renewed focus on dialogue among biodiversity communities and beyond that critically reflects on the past to channel research and action toward fostering just and diverse futures for human and nonhuman life on Earth.

Research field(s)
Natural Sciences, Biology, Ecology

NOMIS Researcher(s)

August 1, 2021

Amyotrophic lateral sclerosis (ALS) is a progressive disease leading to the degeneration of motor neurons (MNs). Neuroinflammation is involved in the pathogenesis of ALS; however, interactions of specific immune cell types and MNs are not well studied. We recently found a shift toward T helper (Th)1/Th17 cell‐mediated, pro‐inflammatory immune responses in the peripheral immune system of ALS patients, which positively correlated with disease severity and progression. Whether Th17 cells or their central mediator, Interleukin‐17 (IL‐17), directly affects human motor neuron survival is currently unknown. Here, we evaluated the contribution of Th17 cells and IL‐17 on MN degeneration using the co‐culture of iPSC‐derived MNs of fused in sarcoma (FUS)‐ALS patients and isogenic controls with Th17 lymphocytes derived from ALS patients, healthy controls, and multiple sclerosis (MS) patients (positive control). Only Th17 cells from MS patients induced severe MN degeneration in FUS‐ALS as well as in wildtype MNs. Their main effector, IL‐17A, yielded in a dose‐dependent decline of the viability and neurite length of MNs. Surprisingly, IL‐17F did not influence MNs. Importantly, neutralizing IL‐17A and anti‐IL‐17 receptor A treatment re-verted all effects of IL‐17A. Our results offer compelling evidence that Th17 cells and IL‐17A do directly contribute to MN degeneration.

Research field(s)
Natural Sciences, Physics & Astronomy, Chemical Physics

Although the study of political behaviour has been traditionally restricted to the social sciences, new advances in political neuroscience and computational cognitive science highlight that the biological sciences can offer crucial insights into the roots of ideological thought and action. Echoing the dazzling diversity of human ideologies, this theme issue seeks to reflect the multiplicity of theoretical and methodological approaches to understanding the nature of the political brain. Cutting-edge research along three thematic strands is presented, including (i) computational approaches that zoom in on fine-grained mechanisms underlying political behaviour, (ii) neurocognitive perspectives that harness neuroimaging and psychophysiological techniques to study ideological processes, and (iii) behavioural studies and policy-minded analyses of such understandings across cultures and across ideological domains. Synthesizing these findings together, the issue elucidates core questions regarding the nature of uncertainty in political cognition, the mechanisms of social influence and the cognitive structure of ideological beliefs. This offers key directions for future biologically grounded research as well as a guiding map for citizens, psychologists and policymakers traversing the uneven landscape of modern polarization, misinformation, intolerance and dogmatism. This article is part of the theme issue ‘The political brain: neurocognitive and computational mechanisms’.

Research field(s)
Natural Sciences, Biology, Evolutionary Biology

NOMIS Researcher(s)

April 9, 2021

As the use of aerial tools such as unmanned aerial vehicles (UAVs) for mangrove monitoring gains in popularity, understanding who leads this research and where is critical for expanding efficient monitoring methods and achieving international commitments to sustainable development, technology transfer and reduced inequality. Between 2000 and 2019, mangrove research using aerial tools was largely conducted in and led by institutions in higher income countries, despite High-income countries accounting for only 9% of global mangrove coverage. Of studies where the country of the lead institution differed from that of the study site, only 38% of the studies included local co-authors. These results echo historical patterns of research conducted by researchers from higher income countries on biodiversity concentrated in lower income countries, frequently with limited involvement of local scientists—known as “helicopter research.” The disconnect between where mangroves are located and where aerial research is conducted may result from barriers such as government restrictions, limited financial and technical resources, language barriers hindering UAV deployment, or hampered findability of local research. Our findings suggest that expertise for aerial surveys currently lies in “High-income, Annex II” and “Upper-middle-income, Non-Annex” countries, and both groups could invest time and resources in building local, long-term technological capacity in Upper-middle, Lower-middle and Low-income countries. We identify strategic partnerships to expand aerial tools for mangrove research that also address commitments under the United Nations Framework Convention on Climate Change and potential international collaborations under the framework proposed by the UN Decade of Ocean Science for Sustainable Development.

Research field(s)
Natural Sciences, Biology, Marine Biology & Hydrobiology

NOMIS Researcher(s)

March 1, 2021

Future global environmental change will have a significant impact on biodiversity through the intersecting forces of climate change, urbanization, human population growth, overexploitation, and pollution. This presents a fundamental challenge to conservation approaches, which seek to conserve past or current assemblages of species or ecosystems in situ. This review canvases diverse approaches to biodiversity futures, including social science scholarship on the Anthropocene and futures thinking alongside models and scenarios from the biophysical science community. It argues that charting biodiversity futures requires processes that must include broad sections of academia and the conservation community to ask what desirable futures look like, and for whom. These efforts confront political and philosophical questions about levels of acceptable loss, and how trade-offs can be made in ways that address the injustices in the distribution of costs and benefits across and within human and non-human life forms. As such, this review proposes that charting biodiversity futures is inherently normative and political. Drawing on diverse scholarship united under a banner of ‘futures thinking’ this review presents an array of methods, approaches and concepts that provide a foundation from which to consider research and decision-making that enables action in the context of contested and uncertain biodiversity futures.

Research field(s)
Natural Sciences, Biology, Ecology

NOMIS Researcher(s)

March 1, 2021

Deficient intracellular transport is a common pathological hallmark of many neuro-degenerative diseases, including amyotrophic lateral sclerosis (ALS). Mutations in the fused-in-sarcoma (FUS) gene are one of the most common genetic causes for familial ALS. Motor neurons carrying a mutation in the nuclear localization sequence of FUS (P525L) show impaired axonal transport of several organelles, suggesting that mislocalized cytoplasmic FUS might directly interfere with the transport machinery. To test this hypothesis, we studied the effect of FUS on kinesin-1 motility in vitro. Using a modified microtubule gliding motility assay on surfaces coated with kinesin-1 motor proteins, we showed that neither recombinant wildtype and P525L FUS variants nor lysates from isogenic ALS-patient-specific iPSC-derived spinal motor neurons expressing those FUS variants significantly affected gliding velocities. We hence conclude that during ALS pathogenesis the initial negative effect of FUS (P525L) on axonal transport is an indirect nature and requires additional factors or mechanisms.

Research field(s)
Natural Sciences, Physics & Astronomy, Chemical Physics

NOMIS Researcher(s)

Published in

January 22, 2021

The upcoming Convention on Biological Diversity (CBD) meeting, and adoption of the new Global Biodiversity Framework, represent an opportunity to transform humanity’s relationship with nature. Restoring nature while meeting human needs requires a bold vision, including mainstreaming biodiversity conservation in society. We present a framework that could support this: the Mitigation and Conservation Hierarchy. This places the Mitigation Hierarchy for mitigating and compensating the biodiversity impacts of developments (1, avoid; 2, minimize; 3, restore; and 4, offset, toward a target such as “no net loss” of biodiversity) within a broader framing encompassing all conservation actions. We illustrate its application by national governments, sub-national levels (specifically the city of London, a fishery, and Indigenous groups), companies, and individuals. The Mitigation and Conservation Hierarchy supports the choice of actions to conserve and restore nature, and evaluation of the effectiveness of those actions, across sectors and scales. It can guide actions toward a sustainable future for people and nature, supporting the CBD’s vision. The adoption of the new Global Biodiversity Framework requires mainstreaming of biodiversity conservation into society. The Mitigation and Conservation Hierarchy places the Mitigation Hierarchy (1, avoid; 2, minimize; 3, restore; and 4, offset biodiversity impacts) within a broader framing encompassing all conservation actions. We illustrate its application by national governments, sub-national levels, companies, and individuals. This integrated framework supports the choice of actions to conserve and restore nature, and evaluation of their effectiveness, across sectors and scales.

Research field(s)
Natural Sciences, Biology, Ecology

NOMIS Researcher(s)

December 1, 2020

Reliable quantitative information on the North Korean economy is extremely scarce. In particular, reliable income per capita and poverty figures for the country are not available. In this contribution, we provide for the first time estimates of absolute poverty rates in North Korean subnational regions based on the combination of innovative remote-sensed night-time light intensity data (monthly information for built areas) with estimated income distributions. Our results, which are robust to the use of different methods to approximate the income distribution in the country, indicate that the share of persons living in extreme poverty in North Korea may be larger than previously thought. We estimate a poverty rate for the country of around 60% in 2018 and a high volatility in the dynamics of income at the national level in North Korea for the period 2012–2018. Income per capita estimates tend to decline significantly from 2012 to 2015 and present a recovery since 2016. The subnational estimates of income and poverty reveal a change in relative dynamics since the second half of the 2012–2018 period. The first part of the period is dominated by divergent dynamics in income across regions, while the second half reveals convergence in regional income.

Research field(s)
Natural Sciences, Earth & Environmental Sciences, Environmental Sciences

NOMIS Researcher(s)

Published in

December 1, 2020

Practical quantum networks require low-loss and noise-resilient optical interconnects as well as non-Gaussian resources for entanglement distillation and distributed quantum computation. The latter could be provided by superconducting circuits but existing solutions to interface the microwave and optical domains lack either scalability or efficiency, and in most cases the conversion noise is not known. In this work we utilize the unique opportunities of silicon photonics, cavity optomechanics and superconducting circuits to demonstrate a fully integrated, coherent transducer interfacing the microwave X and the telecom S bands with a total (internal) bidirectional transduction efficiency of 1.2% (135%) at millikelvin temperatures. The coupling relies solely on the radiation pressure interaction mediated by the femtometer-scale motion of two silicon nanobeams reaching a Vπ as low as 16 μV for sub-nanowatt pump powers. Without the associated optomechanical gain, we achieve a total (internal) pure conversion efficiency of up to 0.019% (1.6%), relevant for future noise-free operation on this qubit-compatible platform.

Research field(s)
Natural Sciences, Physics & Astronomy, Optics

NOMIS Researcher(s)

December 1, 2020

Narratives shape human understanding and underscore policy, practice and action. From individuals to multilateral institutions, humans act based on collective stories. As such, narratives have important implications for revisiting biodiversity. There have been growing calls for a ‘new narrative’ to underpin efforts to address biodiversity decline that, for example, foreground optimism, a more people-centred narrative or technological advances. This review presents some of the main contemporary narratives from within the biodiversity space to reflect on their underpinning categories, myths and causal assumptions. It begins by reviewing various interpretations of narrative, which range from critical views where narrative is a heuristic for understanding structures of domination, to advocacy approaches where it is a tool for reimagining ontologies and transitioning to sustainable futures. The work reveals how the conservation space is flush with narratives. As such, efforts to search for a ‘new narrative’ for conservation can be usefully informed by social science scholarship on narratives and related constructs and should reflect critically on the power of narrative to entrench old ways of thought and practice and, alternatively, make space for new ones. Importantly, the transformative potential of narrative may not lie in superficial changes in messaging, but in using narrative to bring multiple ways of knowing into productive dialogue to revisit biodiversity and foster critical reflection.

Research field(s)
Natural Sciences, Biology, Ecology

NOMIS Researcher(s)

October 29, 2020

Superinductors have a characteristic impedance exceeding the resistance quantum RQ≈6.45kω, which leads to a suppression of ground-state charge fluctuations. Applications include the realization of hardware-protected qubits for fault-tolerant quantum computing, improved coupling to small-dipole-moment objects, and the definition of a new quantum-metrology standard for the ampere. In this work, we refute the widespread notion that superinductors can only be implemented based on kinetic inductance, i.e., using disordered superconductors or Josephson-junction arrays. We present the modeling, fabrication, and characterization of 104 planar aluminum-coil resonators with a characteristic impedance up to 30.9 kω at 5.6 GHz and a capacitance down to ≤1 fF, with low loss and a power handling reaching 108 intracavity photons. Geometric superinductors are free of uncontrolled tunneling events and offer high reproducibility, linearity, and the ability to couple magnetically – properties that significantly broaden the scope of future quantum circuits.

Research field(s)
Natural Sciences, Physics & Astronomy, Applied Physics

NOMIS Researcher(s)

Published in

October 27, 2020

Glacier-fed streams (GFS) are harsh ecosystems dominated by microbial life organized in benthic biofilms, yet the biodiversity and ecosystem functions provided by these communities remain under-appreciated. To better understand the microbial processes and communities contributing to GFS ecosystems, it is necessary to leverage high throughput sequencing. Low biomass and high inorganic particle load in GFS sediment samples may affect nucleic acid extraction efficiency using extraction methods tailored to other extreme environments such as deep-sea sediments. Here, we benchmarked the utility and efficacy of four extraction protocols, including an up-scaled phenolchloroform protocol. We found that established protocols for comparable sample types consistently failed to yield sufficient high-quality DNA, delineating the extreme character of GFS. The methods differed in the success of downstream applications such as library preparation and sequencing. An adapted phenol-chloroform-based extraction method resulted in higher yields and better recovered the expected taxonomic profile and abundance of reconstructed genomes when compared to commercially-available methods. Affordable and straight-forward, this method consistently recapitulated the abundance and genomes of a mock community, including eukaryotes. Moreover, by increasing the amount of input sediment, the protocol is readily adjustable to the microbial load of the processed samples without compromising protocol efficiency. Our study provides a first systematic and extensive analysis of the different options for extraction of nucleic acids from glacier-fed streams for high-throughput sequencing applications, which may be applied to other extreme environments.

Research field(s)
Natural Sciences, Biology, Ecology